CDS

Accession Number TCMCG009C17158
gbkey CDS
Protein Id XP_030500633.1
Location complement(join(75168160..75168324,75168653..75168775,75168864..75168978,75169319..75169417,75169500..75169552,75169672..75169828,75170102..75170160,75170383..75170450,75170574..75170717,75170895..75170958,75171596..75171646,75171742..75171881,75171999..75172138,75172916..75173001,75173103..75173248,75173335..75173407,75174990..75175065,75175280..75175387,75175531..75175577,75176202..75176247,75176503..75176615,75176714..75176749,75176868..75177071,75178277..75178342))
Gene LOC115716070
GeneID 115716070
Organism Cannabis sativa

Protein

Length 792aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA560384
db_source XM_030644773.1
Definition DNA mismatch repair protein MSH4 isoform X2 [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA mismatch repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08740        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0000795        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0099086        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGACGACGGAGGAGAGAAATCAAGCTTCGTGATCGGTCTTATCGAGAACAGAGCCAAAGAGGTTGGAGTAGCTGCTTTTGACTTAAGGTCAGCGTCGTTGCATCTTTCTCAATATATTGAGACTAGCAGTTCATATCAGAATACGAAGACGCTGGTGCATTTTTATGATCCAATGGTGATCATTGTTCCCCCAAACAAGCTGGCACCTGAGGGCATGGTTGGAGTTTCTGAATTGGTAGATAGATTTTATGCTTCAGTCAGGAAGGTTGTAATGGGCCGCAGTTGCTTTGATGACACTAAGGGTGCTGTGCTGATTAAAAATCTAGCTGCTAAGGAACCTTCAGCACTTGGTTTAGATACTTATTACAAGCAATATTATCTGTGCTTGGCTGCTGGTGCTGCTACTATCAAGTGGATTGAAGTTGAGAAAGGACTCATCGTCACAAATCACTCATTATTGGTCACTTTCAATGGATCTTTTGATCATATGAATATTGATGCTACTAGCGTCCAAAATTTGGAGATCATTGAACCATTCCATTCTACATTGTTGGGCACGAGCAATAAGAAAAGAAGTTTGTTCCACATGCTTAAGACTACAAAAACAATTGGAGGGACTAGACTACTTCGTGCCAACCTTTTGCAGCCTTTAAAAGATATTGAAACTATCAACGCACGTCTAGATTGCCTGGATGAACTGACAAGCAACGAACAGCTTTTCTTTGGACTCTCTCAGGTTCTACGTAAATTCCCAAAAGAGACTGATAAGGTACTTTGTCACTTCTGCTTCAAGCCAAAGAAAGTTACAAACGAAGTCTCAGGTGTTGATTTTTCAAGAAAGAGCCAAATTTTAATATCAAGTGTAATTCTTCTGAAAACTGCTCTGGATGCCTTGCCTTTGCTCTCGAAGGTACTTAAGGATGTCAAGAGTTTTCTTCTCGCAAATATCTACAAGTCCGTCTGTGAAAATGAGAAATACGCTCTGATCAGAAAGAGGATCGGAGAGGTGATCGATGAAGATGTGTTGCATGCACGGGTTCCTTTTGTAGCTCGCACGCAGCAATGTTTTGCAGTCAAGGCTGGAATTGATGGATTTTTGGATATTGCCAGGAGATCATTTTGTGATACTAGTGAAGCTATTCATAACCTTGCTAACAAGTACCGTCAAGATTTCAAATTGCCCAATTTAAAACTCCCATTTAACAGTAGGCATGGGTTCTACTTTAGCATTCCACAGAAAGATATTCAAGGAAAACTTCCCAGCCAATTCATTCAGGTTGTGAAACATGGGAATAATATACGTTGCTCAACTCTAGAGCTTGCGTCTCTTAATGTTAGAAACAAGTCAGCGGCTTCAGAATGCTATACAAGAACAGAAATTTGCCTTGAAGCACTAGTAGATGCCATAAGAGAGGATATTTCTGTGCTCACACTGCTTGCAGAGGTCCTATGCCTATTAGATATGATTGTCAATTCTTTTGCTCATGCAATTTCTACCAAGCCTGTTGATCGTTATACTAGACCAGAATTCACAGATGATGGCCCAATGGCAATTGATGCTGGAAGACACCCAATACTAGAAAGCATACACAATGACTTTGTTCCCAATAACATCTTCTTATCGGAGGCATCAAATATGGTGATAGTCATGGGCCCAAACATGAGTGGAAAGAGCACATATCTTCAGCAGCTCTGTCTTATAGTTATTCTTGCTCAGATAGGTTGTTACATTCCAGCCCGCTTCTCAACTCTCCGAGTTGTTGATCGTATATTTACTAGGATGGGTAATGTAGATAATCTGGAATCGAACTCTAGTACGTTCATGACAGAGATGAAAGAGACAGCTTTTGTCATGCAAAATGTTTCCCAAAGGAGTCTAATTGTCATGGATGAACTGGGAAGGGCTACGTCTTCAATTGATGGATTTGCAATTGCATGGAGTTGCTGCGAGTATCTCTTGTCACTGAAAGCGTATACAATATTTGCTACTCACATGGAGAATTTGTCAGAACTAGCAACAATCTACCCCAATGTGAAAATTCTTCACTTTAATGTTGACATTAGAAATAATCGTTTAGACTTTAAGTTTGATCTCAAAGATGGGCCAAGACATATCCCGCACTATGGTCTTCTATTAGCAGAAGTGGCAGGTTTACCAAGCTCGGTGGTTGAAACAGCCAGGAACATCACATCCAGAATAACAGAAAAGGAAGTGAAGCGAATGGAAGTAAACTGCCAACATTATCATCCAATCCAAATGGCTTACCATGTAGCTCAACGTCTAATATGCCTAAAATTTTCGAGCCAAGACGAGGATTCAATCAGACAAGCATTGTGTAATCTTAAAGAGAGCTATATCAATGGAAAGCTTTAG
Protein:  
MEDDGGEKSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLVHFYDPMVIIVPPNKLAPEGMVGVSELVDRFYASVRKVVMGRSCFDDTKGAVLIKNLAAKEPSALGLDTYYKQYYLCLAAGAATIKWIEVEKGLIVTNHSLLVTFNGSFDHMNIDATSVQNLEIIEPFHSTLLGTSNKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIETINARLDCLDELTSNEQLFFGLSQVLRKFPKETDKVLCHFCFKPKKVTNEVSGVDFSRKSQILISSVILLKTALDALPLLSKVLKDVKSFLLANIYKSVCENEKYALIRKRIGEVIDEDVLHARVPFVARTQQCFAVKAGIDGFLDIARRSFCDTSEAIHNLANKYRQDFKLPNLKLPFNSRHGFYFSIPQKDIQGKLPSQFIQVVKHGNNIRCSTLELASLNVRNKSAASECYTRTEICLEALVDAIREDISVLTLLAEVLCLLDMIVNSFAHAISTKPVDRYTRPEFTDDGPMAIDAGRHPILESIHNDFVPNNIFLSEASNMVIVMGPNMSGKSTYLQQLCLIVILAQIGCYIPARFSTLRVVDRIFTRMGNVDNLESNSSTFMTEMKETAFVMQNVSQRSLIVMDELGRATSSIDGFAIAWSCCEYLLSLKAYTIFATHMENLSELATIYPNVKILHFNVDIRNNRLDFKFDLKDGPRHIPHYGLLLAEVAGLPSSVVETARNITSRITEKEVKRMEVNCQHYHPIQMAYHVAQRLICLKFSSQDEDSIRQALCNLKESYINGKL